plone

R-XVector-0.16.0-3.lbn25.x86_64
Memory efficient S4 classes for storing sequences "externally" (behind an R external pointer, or on disk).
Located in LBN / … / Big Data / BastionLinux 25
R-acepack-1.4.1-6.lbn25.x86_64
ACE and AVAS (additivity and variance stabilization) are used to estimate transformations for regression.
Located in LBN / … / Big Data / BastionLinux 25
R-affy-1.54.0-3.lbn25.x86_64
The package contains functions for exploratory oligonucleotide array analysis. The dependancy to tkWidgets only concerns few convenience functions. 'affy' is fully functional without it.
Located in LBN / … / Big Data / BastionLinux 25
R-affyio-1.46.0-3.lbn25.x86_64
Routines for parsing Affymetrix data files based upon file format information. Primary focus is on accessing the CEL and CDF file formats.
Located in LBN / … / Big Data / BastionLinux 25
R-ape-5.0-1.lbn25.x86_64
Functions for reading, writing, plotting, and manipulating phylogenetic trees, analyses of comparative data in a phylogenetic framework, ancestral character analyses, analyses of diversification and macroevolution, computing distances from DNA sequences, reading and writing nucleotide sequences as well as importing from BioConductor, and several tools such as Mantel's test, generalized skyline plots, graphical exploration of phylogenetic data (alex, trex, kronoviz), estimation of absolute evolutionary rates and clock-like trees using mean path lengths and penalized likelihood, dating trees with non-contemporaneous sequences, translating DNA into AA sequences, and assessing sequence alignments. Phylogeny estimation can be done with the NJ, BIONJ, ME, MVR, SDM, and triangle methods, and several methods handling incomplete distance matrices (NJ*, BIONJ*, MVR*, and the corresponding triangle method). Some functions call external applications (PhyML, Clustal, T-Coffee, Muscle) whose results are returned into R.
Located in LBN / … / Big Data / BastionLinux 25
R-argon2-0.2.0-1.lbn25.x86_64
Utilities for secure password hashing via the argon2 algorithm. It is a relatively new hashing algorithm and is believed to be very secure. The 'argon2' implementation included in the package is the reference implementation. The package also includes some utilities that should be useful for digest authentication, including a wrapper of 'blake2b'. For similar R packages, see sodium and 'bcrypt'. See <https://en.wikipedia.org/wiki/Argon2> or <https://eprint.iacr.org/2015/430.pdf> for more information.
Located in LBN / … / Big Data / BastionLinux 25
R-ascii-2.1-1.lbn25.noarch
Coerce R object to asciidoc, txt2tags, restructuredText, org, textile or pandoc syntax. Package comes with a set of drivers for Sweave.
Located in LBN / … / Big Data / BastionLinux 25
R-assertthat-0.2.0-2.lbn25.noarch
assertthat is an extension to stopifnot() that makes it easy to declare the pre and post conditions that you code should satisfy, while also producing friendly error messages so that your users know what they've done wrong.
Located in LBN / … / Big Data / BastionLinux 25
R-backports-1.1.2-2.lbn25.x86_64
Implementations of functions which have been introduced in R since version 3.0.0. The backports are conditionally exported which results in R resolving the function names to the version shipped with R (if available) and uses the implemented backports as fallback. This way package developers can make use of the new functions without worrying about the minimum required R version.
Located in LBN / … / Big Data / BastionLinux 25
R-base64enc-0.1.3-2.lbn25.x86_64
This package provides tools for handling base64 encoding. It is more flexible than the orphaned base64 package.
Located in LBN / … / Big Data / BastionLinux 25

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